- David L. Hubert*, Arnold, K. R.*, Greenspan, Z.G, Pupo, A., Robinson, R.D., Chavarin, V.V., Barter, T.B., Djukovic, D., Raftery D., Vue, Z., Hinton A., McReynolds, M.R., Harrison, B.R., & Phillips, M.A. (2024). Selection for early reproduction leads to accelerated aging and extensive metabolic remodeling in Drosophila melanogaster populations. https://doi.org/10.1101/2024.06.28.601037
[Preprint, submitted to bioRxiv 6/28]
*equal contribution - Greenspan, Z.S., Barter, T.T., Phillips, M.A., Ranz, J.M., Rose, M.R., & Mueller, L.D. Genomewide architecture of adaptation in experimentally evolved Drosophila characterized by widespread pleiotropy. J Genet 103, 8 (2024). https://doi.org/10.1007/s12041-023-01460-8
- Vue, Z., Garza‐Lopez, E., Neikirk, K., Katti, P., Vang, L., Beasley, H., Shao, J., Marshall, A. G., Crabtree, A., Murphy, A. C., Jenkins, B. C., Prasad, P., Evans, C., Taylor, B., Mungai, M., Killion, M., Stephens, D., Christensen, T. A., Lam, J…, Arnold, K. R, … Hinton, A. (2023). 3D reconstruction of murine mitochondria reveals changes in structure during aging linked to the MICOS complex. Aging Cell, 22(12), e14009. https://doi.org/10.1111/acel.14009
- Arnold, K. R., & Rose, M. R. (2023). Conceptual Breakthroughs in the Evolutionary Biology of Aging. San Diego, CA: Academic Press. 2023
- Kezos, J. N., Barter, T. T., Phillips, M. A., Cabral, L. G., Greenspan, Z. S., Arnold, K. R., Azatian, G., Buenrostro, J., Bhangoo, P. S., Khong, A., Reyes, G. T., Rahman, A., Humphrey, L. A., Bradley, T. J., Mueller, L. D., & Rose, M. R. (2023). Building Bridges from Genome to Physiology Using Machine Learning and Drosophila Experimental Evolution. Physiological and Biochemical Zoology, 96(3), 192–205. https://doi.org/10.1086/724827
- Phillips, M. A., Arnold, K. R., Vue, Z., Beasley, H. K., Garza-Lopez, E., Marshall, A. G., Morton, D. J., McReynolds, M. R., Barter, T. T., & Hinton, A., Jr. (2022). Combining Metabolomics and Experimental Evolution Reveals Key Mechanisms Underlying Longevity Differences in Laboratory Evolved Drosophila melanogaster Populations. International Journal of Molecular Sciences. 2022; 23(3):1067. https://doi.org/10.3390/ijms23031067
- Parvin Shahrestani, Elizabeth King, Reza Ramezan, Mark Phillips, Melissa Riddle, Marisa Thornburg, Zachary Greenspan, Yonathan Estrella, Kelly Garcia, Pratik Chowdhury, Glen Malarat, Ming Zhu, Susan M Rottshaefer, Stephen Wraight, Michael Griggs, John Vandenberg, Anthony D Long, Andrew G Clark, Brian P Lazzaro, The molecular architecture of Drosophila melanogaster defense against Beauveria bassiana explored through evolve and resequence and quantitative trait locus mapping, G3 Genes|Genomes|Genetics, Volume 11, Issue 12, December 2021, jkab324, https://doi.org/10.1093/g3journal/jkab324
- Arnold, K. R., Kezos, J. N., Rutledge, G. A., Barter, T. T., & Rose, M. R. (2020). An Evolutionary Analysis of Health. In J. Sholl & S. I. S. Rattan (Eds.), Explaining Health Across the Sciences (pp. 13–34). Springer International Publishing. https://doi.org/10.1007/978-3-030-52663-4_2
- Barter, T.T., Greenspan, Z.S., Phillips, M.A., Mueller, L.D., Rose, M.R., & Ranz, J.M. Drosophila transcriptomics with and without ageing. Biogerontology 20, 699–710 (2019). https://doi.org/10.1007/s10522-019-09823-4
- Kezos, J. N., Phillips, M. A., Thomas, M. D., Ewunkem, A. J., Rutledge, G. A., Barter, T. T., Santos, M. A., Wong, B. D., Arnold, K. R., Humphrey, L. A., Yan, A., Nouzille, C., Sanchez, I., Cabral, L. G., Bradley, T. J., Mueller, L. D., Graves, J. L., & Rose, M. R. (2019). Genomics of Early Cardiac Dysfunction and Mortality in Obese Drosophila melanogaster. Physiological and Biochemical Zoology, 92(6), 591–611. https://doi.org/10.1086/706099
- Phillips, M.A., Rutledge, G.A., Kezos, J.N., Greenspan, Z.S., Talbott, A., Matty, S., Arain, H., Mueller, L.D., Rose, M.R., & Shahrestani, P. Effects of evolutionary history on genome wide and phenotypic convergence in Drosophila populations. BMC Genomics 19, 743 (2018). https://doi.org/10.1186/s12864-018-5118-7
- Laurence D Mueller, Mark A Phillips, Thomas T Barter, Zachary S Greenspan, Michael R Rose, Genome-Wide Mapping of Gene–Phenotype Relationships in Experimentally Evolved Populations, Molecular Biology and Evolution, Volume 35, Issue 8, August 2018, Pages 2085–2095, https://doi.org/10.1093/molbev/msy113
- Phillips, M., Long, A., Greenspan, Z., Greer, L., Burke, M., Villeponteau, B., Matsagas, K., Rizza, C., Mueller, L., & Rose, M. Genome-wide analysis of long-term evolutionary domestication in Drosophila melanogaster. Sci Rep 6, 39281 (2016). https://doi.org/10.1038/srep39281